Prof. BERNA SARIYAR AKBULUT
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Marmara University
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Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes
Curcumin Displays Enhanced Solubility and Antibacterial Activities When Complexed with the Cell Penetrating Peptide pVEC
Koleoglu E.
,
Acar T.
,
DERMAN S.
,
SARIYAR AKBULUT B.
INTERNATIONAL JOURNAL OF PEPTIDE RESEARCH AND THERAPEUTICS, vol.28, no.4, 2022 (Journal Indexed in SCI)
Carvacrol Enhances the Antimicrobial Potency of Berberine in Bacillus subtilis
Atas B.
,
Aksoy C. S.
,
Avci F. G.
,
SAYAR N. A.
,
Ulgen K.
,
ÖZKIRIMLI ÖLMEZ E.
, et al.
CURRENT MICROBIOLOGY, vol.79, no.5, 2022 (Journal Indexed in SCI)
Tyrosinase-based production of L-DOPA by Corynebacterium glutamicum
Kurpejovic E.
,
Wendisch V. F.
,
SARIYAR AKBULUT B.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, vol.105, no.24, pp.9103-9111, 2021 (Journal Indexed in SCI)
Live Cell Imaging of Peptide Uptake Using a Microfluidic Platform
Yuce M.
,
ÖZKIRIMLI ÖLMEZ E.
,
SARIYAR AKBULUT B.
,
Ulgen K.
INTERNATIONAL JOURNAL OF PEPTIDE RESEARCH AND THERAPEUTICS, vol.27, pp.2003-2013, 2021 (Journal Indexed in SCI)
Identification of novel inhibitors of the ABC transporter BmrA
Serçinoğlu O.
,
Senturk D.
,
Altinisik K.
,
Avci F.
,
Frlan R.
,
Tomašič T.
, et al.
BIOORGANIC CHEMISTRY, vol.105, 2020 (Journal Indexed in SCI)
Potentiating the activity of berberine for Staphylococcus aureus in a combinatorial treatment with thymol
Aksoy C. S.
,
Avci F. G.
,
Ugurel O. M.
,
Atas B.
,
SAYAR N. A.
,
Akbulut B.
MICROBIAL PATHOGENESIS, vol.149, 2020 (Journal Indexed in SCI)
Techno-economic analysis of caffeine and catechins production from black tea waste
SAYAR N. A.
,
DURMAZ ŞAM S.
,
PİNAR O.
,
Serper D.
,
SARIYAR AKBULUT B.
,
KAZAN D.
, et al.
Food And Bioproducts Processing, vol.118, pp.1-12, 2019 (Journal Indexed in SCI)
Repurposing bioactive aporphine alkaloids as efflux pump inhibitors
Avci F. G.
,
Atas B.
,
Aksoy C. S.
,
Kurpejovic E.
,
Toplan G. G.
,
GÜRER Ç.
, et al.
FITOTERAPIA, vol.139, 2019 (Journal Indexed in SCI)
A method for the quantitative determination of glycerophospholipid regioisomers by UPLC-ESI-MS/MS
Wozny K.
,
Lehmann W. D.
,
Wozny M.
,
SARIYAR AKBULUT B.
,
Bruegger B.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, vol.411, no.4, pp.915-924, 2019 (Journal Indexed in SCI)
What Are the Multi-Omics Mechanisms for Adaptation by Microorganisms to High Alkalinity? A Transcriptomic and Proteomic Study of a Bacillus Strain with Industrial Potential
ALTINIŞIK KAYA F. E.
,
Avci F. G.
,
SAYAR N. A.
,
KAZAN D.
,
SAYAR A. A.
,
SARIYAR AKBULUT B.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, vol.22, no.11, pp.717-732, 2018 (Journal Indexed in SCI)
Retro-techno-economic evaluation of acetic acid production using cotton stalk as feedstock
SAYAR N. A.
,
KAZAN D.
,
PİNAR O.
,
SARIYAR AKBULUT B.
,
SAYAR A. A.
JOURNAL OF MATERIAL CYCLES AND WASTE MANAGEMENT, vol.20, no.4, pp.2077-2088, 2018 (Journal Indexed in SCI)
Targeting a hidden site on class A beta-lactamases
Avci F. G.
,
ALTINIŞIK KAYA F. E.
,
Karacan I.
,
Karagoz D. S.
,
Ersahin S.
,
Eren A.
, et al.
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, vol.84, pp.125-133, 2018 (Journal Indexed in SCI)
Membrane Active Peptides and Their Biophysical Characterization
Avci F. G.
,
SARIYAR AKBULUT B.
,
ÖZKIRIMLI ÖLMEZ E.
BIOMOLECULES, vol.8, no.3, 2018 (Journal Indexed in SCI)
pVEC hydrophobic N-terminus is critical for antibacterial activity
ALAYBEYOĞLU B.
,
SARIYAR AKBULUT B.
,
ÖZKIRIMLI ÖLMEZ E.
Journal Of Peptide Science, vol.24, pp.3083, 2018 (Journal Indexed in SCI Expanded)
An OMIC approach to elaborate the antibacterial mechanisms of different alkaloids
Avci F. G.
,
SAYAR N. A.
,
Akbulut B.
PHYTOCHEMISTRY, vol.149, pp.123-131, 2018 (Journal Indexed in SCI)
Transcriptomic analysis displays the effect of (-)-roemerine on the motility and nutrient uptake in Escherichia coli
Ayyildiz D.
,
ARĞA K. Y.
,
Avci F. G.
,
ALTINIŞIK KAYA F. E.
,
Gurer C.
,
Toplan G. G.
, et al.
CURRENT GENETICS, vol.63, no.4, pp.709-722, 2017 (Journal Indexed in SCI)
Response of Escherichia coli to Prolonged Berberine Exposure
Gokgoz N. B.
,
Avci F. G.
,
Yoneten K. K.
,
Alaybeyoglu B.
,
ÖZKIRIMLI ÖLMEZ E.
,
SAYAR N. A.
, et al.
MICROBIAL DRUG RESISTANCE, vol.23, no.5, pp.531-544, 2017 (Journal Indexed in SCI)
The effect of a beta-lactamase inhibitor peptide on bacterial membrane structure and integrity: a comparative study
Alaybeyoglu B.
,
ULUOCAK B. B.
,
SARIYAR AKBULUT B.
,
ÖZKIRIMLI ÖLMEZ E.
JOURNAL OF PEPTIDE SCIENCE, vol.23, no.5, pp.374-383, 2017 (Journal Indexed in SCI)
An evolutionarily conserved allosteric site modulates beta-lactamase activity
Avci F. G.
,
ALTINIŞIK KAYA F. E.
,
Vardar Ulu D.
,
ÖZKIRIMLI ÖLMEZ E.
,
SARIYAR AKBULUT B.
JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY, vol.31, pp.33-40, 2016 (Journal Indexed in SCI)
Insights into membrane translocation of the cell-penetrating peptide pVEC from molecular dynamics calculations
Alaybeyoglu B.
,
SARIYAR AKBULUT B.
,
ÖZKIRIMLI ÖLMEZ E.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, vol.34, no.11, pp.2387-2398, 2016 (Journal Indexed in SCI)
Proteomics Evidence for the Activity of the Putative Antibacterial Plant Alkaloid (-)-Roemerine: Mainstreaming Omics-Guided Drug Discovery
Gokgoz N. B.
,
SARIYAR AKBULUT B.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, vol.19, no.8, pp.478-489, 2015 (Journal Indexed in SCI)
A novel chimeric peptide with antimicrobial activity
Alaybeyoglu B.
,
SARIYAR AKBULUT B.
,
ÖZKIRIMLI ÖLMEZ E.
JOURNAL OF PEPTIDE SCIENCE, vol.21, no.4, pp.294-301, 2015 (Journal Indexed in SCI)
Investigation of the in vivo interaction between beta-lactamase and its inhibitor protein
Budeyri Gokgoz N.
,
Yalaz S.
,
Avci N. G.
,
BULDUM G.
,
ÖZKIRIMLI ÖLMEZ E.
,
SARIYAR AKBULUT B.
TURKISH JOURNAL OF BIOLOGY, vol.39, no.3, pp.485-492, 2015 (Journal Indexed in SCI)
The importance of a conserved residue of the H10 helix in beta-lactamase
Avci F. G.
,
ÖZKIRIMLI ÖLMEZ E.
,
SARIYAR AKBULUT B.
NEW BIOTECHNOLOGY, vol.31, 2014 (Journal Indexed in SCI)
Assessment of Berberine as a Multi-target Antimicrobial: A Multi-omics Study for Drug Discovery and Repositioning
Karaosmanoglu K.
,
SAYAR N. A.
,
KURNAZ I.
,
SARIYAR AKBULUT B.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, vol.18, no.1, pp.42-53, 2014 (Journal Indexed in SCI)
Purification and characterization of a thermo and acid-stable endo-1,3-1,4-beta-glucanase from Bacillus amyliquefaciens YMNg47
DUMAN Y.
,
KORKMAZ GÜVENMEZ H.
,
ARIKAN B.
,
DİNÇER S.
,
Denizci A. A.
,
SARIYAR AKBULUT B.
, et al.
NEW BIOTECHNOLOGY, vol.29, 2012 (Journal Indexed in SCI)
Osmoadaptation of a moderately halophilic microorganisms under cold stress
Ayan B.
,
SARIYAR AKBULUT B.
,
Poli A.
,
Ozturk U.
,
Ozturk N. C.
,
Denizci A. A.
, et al.
NEW BIOTECHNOLOGY, vol.29, 2012 (Journal Indexed in SCI)
Adaptive changes in the lipid distribution of a moderately halophilic microorganism under salt stress
Ozturk H. U.
,
Ozturk N. C.
,
Poli A.
,
Nicolaus B.
,
Ayan B.
,
Denizci A. A.
, et al.
NEW BIOTECHNOLOGY, vol.29, 2012 (Journal Indexed in SCI)
Production of industrial enzymes for feed industry
Sogut M. S.
,
Ozturk N. C.
,
Ozturk H. U.
,
Pinar O.
,
Ipek F. M.
,
Cayir E.
, et al.
NEW BIOTECHNOLOGY, vol.29, 2012 (Journal Indexed in SCI)
Interplay of adaptive capabilities of Halomonas sp AAD12 under salt stress
Ceylan S.
,
Yılan G.
,
Sarıyar Akbulut B.
,
Poli A.
,
Kazan D.
JOURNAL OF BIOSCIENCE AND BIOENGINEERING, vol.114, pp.45-52, 2012 (Journal Indexed in SCI)
Thermostable alpha-amylase from moderately halophilic Halomonas sp AAD21
Uzyol K. S.
,
SARIYAR AKBULUT B.
,
Denizci A. A.
,
KAZAN D.
TURKISH JOURNAL OF BIOLOGY, vol.36, no.3, pp.327-338, 2012 (Journal Indexed in SCI)
Proteomic insight into phenolic adaptation of a moderately halophilic Halomonas sp strain AAD12
Ceylan S.
,
SARIYAR AKBULUT B.
,
Denizci A. A.
,
Kazan D.
CANADIAN JOURNAL OF MICROBIOLOGY, vol.57, no.4, pp.295-302, 2011 (Journal Indexed in SCI)
Proteomic response of Escherichia coli to the alkaloid extract of Papaver polychaetum
Ozbalci C.
,
Ünsal C.
,
KAZAN D.
,
SARIYAR AKBULUT B.
ANNALS OF MICROBIOLOGY, vol.60, no.4, pp.709-717, 2010 (Journal Indexed in SCI)
Cellular distribution of activity for three enzymes with maltose binding protein as fusion partner and the structural implications
Utkur O. F.
,
SARIYAR AKBULUT B.
,
Hortacsu A.
TURKISH JOURNAL OF CHEMISTRY, vol.34, no.1, pp.1-13, 2010 (Journal Indexed in SCI)
Dynamic Analysis of Beta-lactamase Ligand Recognition
Kanlikilicer P.
,
Budeyri N.
,
SARIYAR AKBULUT B.
,
Hortacsu A.
,
ÖZKIRIMLI ÖLMEZ E.
BIOPHYSICAL JOURNAL, vol.96, no.3, 2009 (Journal Indexed in SCI)
Rapid differentiation of new isolates with MALDI TOF mass spectrometry via discriminant function analysis based on principal components
SARIYAR AKBULUT B.
Korean J. Chem. Eng., vol.26, pp.1645-1651, 2009 (Journal Indexed in SCI Expanded)
Discriminant Function Analysis Based on Principal ComponentsforRapid Discrimination of Metabolic Capabilities of New Isolates
SARIYAR AKBULUT B.
Chem. Biochem. Eng. Q., vol.24, pp.119-127, 2009 (Journal Indexed in SCI Expanded)
Preliminary phenotypic characterization of newly isolated halophilic microorganisms by footprinting: a rapid metabolome analysis
Sariyar-Akbulut B.
,
Salman-Dilgimen A.
,
Ceylan S.
,
Perk S.
,
Denizci A. A.
,
Kazan D.
ARCHIVES OF MICROBIOLOGY, vol.189, no.1, pp.19-26, 2008 (Journal Indexed in SCI)
Monte Carlo sampling and principal component analysis of flux distributions yield topological and modular information on metabolic networks
Sariyar B.
,
Perk S.
,
Akman U.
,
Hortacsu A.
JOURNAL OF THEORETICAL BIOLOGY, vol.242, no.2, pp.389-400, 2006 (Journal Indexed in SCI)
Metabolic flux analysis of recombinant protein overproduction in Escherichia coli
Özkan P.
,
SARIYAR AKBULUT B.
,
Ütkür Ö.
,
AKMAN Ş. U.
,
Hortacsu A.
Biochemical Engineering Journal, vol.22, pp.167-195, 2005 (Journal Indexed in SCI Expanded)
Expression and translocation of glucose isomerase as a fusion protein in E coli
SARIYAR AKBULUT B.
,
Özkan P.
,
Kırdar B.
,
Hortacsu A.
Enzyme And Microbial Technology, vol.35, pp.105-112, 2004 (Journal Indexed in SCI Expanded)
Mathematical modelling of Sec pathway mechanism in Escherichia coli a case study for periplasmic translocation of maltose binding protein glucose isomerase fusion protein
SARIYAR AKBULUT B.
,
Hortaçsu A.
Chemical Engineering Science, vol.59, pp.1027-1038, 2004 (Journal Indexed in SCI Expanded)
Metabolic Engineering through Cofactor Manipulation and Its Effects on Metabolic Flux Redistribution in Escherichia coli
Ka Y. S.
,
George N B.
,
Susana J B.
,
Ravi V V.
,
YeaTyng Y.
,
Horton E.
, et al.
Metabolic Engineering, vol.4, pp.182-192, 2002 (Journal Indexed in SCI Expanded)
Articles Published in Other Journals
Curvularia lunata: A fungus for possible berberine transformation
Yılmaz D.
,
AVCI F. G.
,
SARIYAR AKBULUT B.
International Journal of Secondary Metabolite, vol.9, no.1, pp.66-73, 2022 (Other Refereed National Journals)
Moderately Halophilic Bacterium Halomonas. sp. AAD12: A promising candidate as a Hydroxyectoine Producer
Öztürk H. Ü.
,
Sarıyar Akbulut B.
,
Ayan B.
,
Poli A.
,
Denizci A. A.
,
Utkan G.
, et al.
J Microb Biochem Technol, vol.7, pp.262-268, 2015 (Refereed Journals of Other Institutions)
Books & Book Chapters
Antibacterial and antifungal activities of isoquinoline alkaloids of the Papaveraceae and Fumariaceae families and their implications in structure–activity relationships
AVCI F. G.
,
ATAŞ B.
,
GÜLSOY TOPLAN G.
,
GURER Ç.
,
SARIYAR AKBULUT B.
in: Studies in Natural Products Chemistry, Atta-ur-Rahman, Editor, Elsevier, pp.87-118, 2021
Antibiyotik Üretimi
Avci F. G.
,
Sayar N. A.
,
Sariyar Akbulut B.
in: Fermente Ürünler Teknolojisi ve Mikrobiyolojisi, Erkmen,Osman; Erten,Hüseyin,Sağlam,Hidayet, Editor, Nobel Akademik Yayıncılık, Ankara, pp.721-738, 2020
Protein İzolasyonu ve Analizi
Sarıyar Akbulut B.
,
Kazan D.
in: Moleküler Üroloji, Türkeriü L.N.,Özer,Aç,Narter,F, Editor, Pelin Offset, Ankara, pp.583-597, 2012
Protein-Peptide Interactions Revolutionize Drug Development
Sarıyar Akbulut B.
,
Özkırımlı Ölmez E.
in: Binding Protein, Ktob Abdelmohsen, Editor, InTech, Rijeka, pp.49-72, 2012
Publication Network
