Assoc. Prof. ÖZAL MUTLU

Publication Network

Articles 31

1. Structural insights into the dynamics of anti-microbial peptides Temporin-1RNa and 1RNb, and derivatives in aqueous and octanol media

Albayrak Karahan E., Büyükkurt S., Mutlu Ö.

JOURNAL OF MOLECULAR LIQUIDS , vol.439, pp.128855-128867, 2025 (SCI-Expanded, Scopus)

2. Expression, Purification and Biochemical Characterisation of Babesia bigemina Lactate Dehydrogenase

Bostancioglu S. M., Danis O., Kocer S., Mutlu Ö.

Molecular Biotechnology , pp.1-12, 2025 (SCI-Expanded, Scopus)

3. Exploring novel inhibitors for Babesia bigemina lactate dehydrogenase: a computational structural biology perspective

Bostancioglu S. M., Mutlu Ö.

PARASITOLOGY RESEARCH , vol.124, pp.1-16, 2025 (SCI-Expanded)

4. The role of PCD in sexual dimorphism of dioecious Spinacia oleracea L.

Aytürk Ö., mutlu o., Karadeniz A.

Journal of advanced research in natural and applied sciences (Online) , vol.9, no.3, pp.688-696, 2023 (Peer-Reviewed Journal)

5. Identification of novel compounds against Acinetobacter baumannii 3-oxoacyl-[acyl-carrier-protein] synthase I (FabB) via comprehensive structure-based computational approaches.

Albayrak E., Koçer S., Mutlu Ö.

Journal of molecular graphics & modelling , vol.124, pp.108565, 2023 (SCI-Expanded)

6. Heterologous expression, purification, and partial characterisation of the apicoplast protein 3-oxoacyl-[acyl-carrier-protein] reductase from Toxoplasma gondii

Aygün C., Kocer S., DANIŞ Ö., ÇUBUK S., MUTLU Ö.

Protein Expression and Purification , vol.202, 2023 (SCI-Expanded, Scopus)

7. Heterologous expression, biochemical characterisation and computational analysis of Bacteroides fragilis enolase

Ugurel E., Kocer S., Sariyer E., MUTLU Ö., Inci T. G., Ugurel O. M., et al.

Computational Biology and Chemistry , vol.98, 2022 (SCI-Expanded)

8. Targeting SARS-CoV-2 Nsp12/Nsp8 interaction interface with approved and investigational drugs: anin silicostructure-based approach

Mutlu Ö., Ugurel O., Sariyer E., Ata O., Inci T., Ugurel E., et al.

JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS , vol.40, no.2, pp.918-930, 2022 (SCI-Expanded, Scopus) Sustainable Development

9. Computational characterisation ofToxoplasma gondiiFabG (3-oxoacyl-[acyl-carrier-protein] reductase): a combined virtual screening and all-atom molecular dynamics simulation study

Aygun C., MUTLU Ö.

JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS , vol.40, no.5, pp.1952-1969, 2022 (SCI-Expanded) Sustainable Development

10. Identification of potential inhibitors of Trichomonas vaginalis iron-containing superoxide dismutase by computer-aided drug design approach

Kocer S., MUTLU Ö.

STRUCTURAL CHEMISTRY , vol.32, pp.1873-1882, 2021 (SCI-Expanded) Sustainable Development

11. Identification of benzamide inhibitors of histone deacetylase 1 from Babesia and Theileria species via high-throughput virtual screening and molecular dynamics simulations

Gurboga M., Kugu G., Kamberaj H., MUTLU Ö.

PARASITOLOGY RESEARCH , vol.120, pp.2175-2187, 2021 (SCI-Expanded, Scopus) Sustainable Development

12. Hit identification against peptidyl-prolyl isomerase of Theileria annulata by combined virtual high-throughput screening and molecular dynamics simulation approach

Spahi S., MUTLU Ö., Sariyer E., Kocer S., Ugurel E., Turgut-Balik D.

Computational Biology and Chemistry , vol.89, 2020 (SCI-Expanded)

13. Evaluation of the potency of FDA-approved drugs on wild type and mutant SARS-CoV-2 helicase (Nsp13)

Ugurel O., Mutlu Ö., Sariyer E., Kocer S., Ugurel E., Inci T., et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES , vol.163, pp.1687-1696, 2020 (SCI-Expanded) Sustainable Development

14. Discovery and evaluation of inhibitory activity and mechanism of arylcoumarin derivatives on Theileria annulata enolase by in vitro and molecular docking studies

Yakarsonmez S., Danış Ö., Mutlu Ö., Topuzoğulları M., Sariyer E., Yuce-Dursun B., et al.

MOLECULAR DIVERSITY , vol.24, no.4, pp.1149-1164, 2020 (SCI-Expanded)

15. Preparation and antimicrobial properties of LL-37 peptide immobilized lignin/caprolactone polymer film

OGAN A., Yuce-Dursun B., Abdullah D., Beyler-Cigil A., KAHRAMAN M. V., ÇAĞLAYAN P., et al.

POLYMERS FOR ADVANCED TECHNOLOGIES , vol.31, no.10, pp.2222-2228, 2020 (SCI-Expanded, Scopus)

16. Assessment of mitogen-activated protein kinases as therapeutic targets for the treatment of babesiosis and theileriosis

MUTLU Ö.

TURKISH JOURNAL OF VETERINARY & ANIMAL SCIENCES , vol.44, no.3, pp.702-713, 2020 (SCI-Expanded) Sustainable Development

17. Experimentation and analysis of powder injection molded Ti10Nb10Zr alloy: a promising candidate for electrochemical and biomedical application

Yemisci I., MUTLU Ö., GÜLSOY N., Kunal K., Atre S., GÜLSOY H. Ö.

JOURNAL OF MATERIALS RESEARCH AND TECHNOLOGY-JMR&T , vol.8, no.6, pp.5233-5245, 2019 (SCI-Expanded)

18. Novel hydroxyapatite/graphene oxide/collagen bioactive composite coating on Ti16Nb alloys by electrodeposition

Yilmaz E., Cakiroglu B., Gokce A., Findik F., GÜLSOY H. Ö., GÜLSOY N., et al.

MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS , vol.101, pp.292-305, 2019 (SCI-Expanded)

19. Functional analyses of dipeptide and pentapeptide insertions on Theileria annulata enolase by site-directed mutagenesis and in silico approaches

Yakarsonmez S., Cengiz E. C., MUTLU Ö., Turgut-Balik D.

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS , vol.1867, pp.732-739, 2019 (SCI-Expanded)

20. Inhibitory effects of arylcoumarin derivatives on Bacteroides fragilis D-lactate dehydrogenase

Ugurel E., Danış Ö., Mutlu Ö., Yuce-Dursun B., Gunduz C., Turgut-Balik D.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES , vol.127, pp.197-203, 2019 (SCI-Expanded)

21. Computational insight into the phthalocyanine-DNA binding via docking and molecular dynamics simulations

Ozalp L., Erdem S. S., Yuce-Dursun B., MUTLU Ö., Ozbil M.

COMPUTATIONAL BIOLOGY AND CHEMISTRY , vol.77, pp.87-96, 2018 (SCI-Expanded)

22. Introduction of novel thermostable alpha-amylases from genus Anoxybacillus and proposing to group the Bacillaceae related alpha-amylases under five individual GH13 subfamilies

CİHAN A. Ç., Yildiz E. D., Sahin E., MUTLU Ö.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY , vol.34, no.7, 2018 (SCI-Expanded, Scopus)

23. Functional and structural characterization of the pentapeptide insertion of Theileria annulata lactate dehydrogenase by site-directed mutagenesis, comparative modeling and molecular dynamics simulations

ERDEMİR ÜSTÜNDAĞ A., MUTLU Ö.

JOURNAL OF MOLECULAR GRAPHICS & MODELLING , vol.74, pp.344-351, 2017 (SCI-Expanded)

24. Comprehensive structural analysis of the open and closed conformations of Theileria annulata enolase by molecular modelling and docking

MUTLU Ö., Yakarsonmez S., Sariyer E., DANIŞ Ö., Yuce-Dursun B., Topuzogullari M., et al.

COMPUTATIONAL BIOLOGY AND CHEMISTRY , vol.64, pp.134-144, 2016 (SCI-Expanded)

25. Biochemical and in silico Characterization of Recombinant L-Lactate Dehydrogenase of Theileria annulata

Nural B., ERDEMİR ÜSTÜNDAĞ A., MUTLU Ö., Yakarsonmez S., DANIŞ Ö., TOPUZOĞULLARI M., et al.

MOLECULAR BIOTECHNOLOGY , vol.58, no.4, pp.256-267, 2016 (SCI-Expanded)

26. Effect of Zr, Nb and Ti addition on injection molded 316L stainless steel for bio-applications: Mechanical, electrochemical and biocompatibility properties

Gülsoy H. Ö., Pazarlioglu S. S., Gülsoy N., Gundede B., Mutlu Ö.

JOURNAL OF THE MECHANICAL BEHAVIOR OF BIOMEDICAL MATERIALS , vol.51, pp.215-224, 2015 (SCI-Expanded)

27. GENOTOXIC EFFECTS OF BORIC ACID AND BORAX IN ZEBRAFISH, DANIO RERIO USING ALKALINE COMET ASSAY

GÜLSOY N., Yavas C., MUTLU Ö.

EXCLI JOURNAL , vol.14, pp.890-899, 2015 (SCI-Expanded)

28. In Silico Molecular Modeling and Docking Studies on the Leishmanial Tryparedoxin Peroxidase

Mutlu O.

BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY , vol.57, no.2, pp.244-252, 2014 (SCI-Expanded) Sustainable Development

29. Single Mutation in Shine-Dalgarno-Like Sequence Present in the Amino Terminal of Lactate Dehydrogenase of Plasmodium Effects the Production of an Eukaryotic Protein Expressed in a Prokaryotic System

ÇİÇEK M., MUTLU Ö., ERDEMİR ÜSTÜNDAĞ A., Ozkan E., Saricay Y., Turgut-Balik D.

MOLECULAR BIOTECHNOLOGY , vol.54, no.2, pp.602-608, 2013 (SCI-Expanded)

30. Molecular modeling, structural analysis and identification of ligand binding sites of trypanothione reductase from Leishmania mexicana

Mutlu O.

JOURNAL OF VECTOR BORNE DISEASES , vol.50, no.1, pp.38-44, 2013 (SCI-Expanded)

31. Kinetic Analysis of the Amino Terminal End of Active Site Loop of Lactate Deyhdrogenase from Plasmodium Vivax

MUTLU Ö., Turgut-Balik D.

BALKAN MEDICAL JOURNAL , vol.29, no.4, pp.364-369, 2012 (SCI-Expanded)

Papers Presented at Peer-Reviewed Scientific Conferences 29

1. Investigation of Bacteroides fragilis Enolase Inhibitors Using in silico Methods

Uğurel E., YAKARSÖNMEZ S., SARIYER E., MUTLU Ö., UĞUREL O. M., BALIK D.

Eurasian Congress of Molecular Biotechnology (ECOMB 2019), Trabzon, Turkey, 19 - 21 September 2019, (Summary Text)

2. Bacteriodes Fragillis Enolaz Inhibitorü Belirlenmesine Yönelik Sanal Ligand Tarama Ve Moleküler Yanaştırma Çalışmaları

Uğurel E., YAKARSÖNMEZ S., SARIYER E., MUTLU Ö., UĞUREL O. M., BALIK D.

31. Ulusal Kimya Kongresi, İstanbul, Turkey, 10 - 13 September 2019, (Summary Text)

3. Comparative Modelling and Molecular Dynamic Simulation of Bacteriodes fragillis Enolase

Uğurel E., YAKARSÖNMEZ S., SARIYER E., MUTLU Ö., UĞUREL O. M., BALIK D.

6th International BAU Drug Design Congress, Istanbul, Turkey, 13 - 15 December 2018

4. Cloning, heterologous expression and purification of Toxoplasma gondii FabG (3-oxoacyl-[acyl-carrier-protein] reductase) enzyme

Aygün C., YAKARSÖNMEZ S., MUTLU Ö.

1.Euroasia Biochemical Approaches Technologies Congress (EBAT 2018), Antalya, Turkey, 27 - 30 October 2018

5. Structural modelling and molecular docking analysis of Trichomonas vaginalis iron-containing superoxide dismutase towards computer-aided drug design

YAKARSÖNMEZ S., MUTLU Ö.

1.Euroasia Biochemical Approaches Technologies Congress (EBAT 2018), Antalya, Turkey, 27 - 30 October 2018

6. Trichomonas vaginalis Tedavisinde in silico Analizlerle Yeni Aday İlaçların Belirlenmesi İçin 14-3-3 Proteininin Modellenmesi

YAKARSÖNMEZ S., MUTLU Ö., BALIK D.

19. UluslararasıKatılımlı Ulusal Biyoteknoloji Kongresi, Eskişehir, 1 -3 Aralık 2017., Turkey, 1 - 03 December 2017, (Summary Text)

7. Molecular modelling and docking studies on 3-oxoacyl-[acyl-carrier-protein] reductase enzyme (FabG) of Toxoplasma gondii

Aygün C., Mutlu Ö., Danış Ö.

The International Symposium on Chemistry via Computation, Applications on Molecular Motors, İstanbul, Turkey, 30 October 2017, (Summary Text)

8. In silico Analyses of both Wild Type and Mutant TaPIN1 towards New Drug Discovery

Spahi S., SARIYER E., MUTLU Ö., YAKARSÖNMEZ S., BALIK D.

5th International BAU-Drug Design Congress, Istanbul, Turkey, 19 - 21 October 2017

9. Molecular docking analyses of coumarin derivatives as Theileria annulata enolase inhibitors

Yakarsönmez S., Mutlu Ö., Danış Ö., Balık D.

5. International BAU Drug Design Congress, İstanbul, Turkey, 19 - 21 October 2017, (Summary Text)

10. Analysis of the interaction interface of the possible protein kinase CK2-alpha 1 (CK2A1)-histone deacetylase 1/2 (HDAC1/2) complexes in Trypanosoma brucei by molecular dynamics

MUTLU Ö., KAMBERAJ H.

15th International Congress of Protistology, 30 July - 04 August 2017, (Summary Text) Sustainable Development

11. Mitogen-activated protein kinases (MAPKs) as therapeutic targets for the treatment of Babesiosis and Theileriosis

MUTLU Ö.

15th International Congress of Protistology, 30 July - 04 August 2017, (Summary Text)

12. Functional classification of proteins having role in cellular response to nanoparticles: A proteome-wide and bioinformatics approach

MUTLU Ö., GÜLSOY N.

1st International Conference of Applied Sciences, Engineering and Mathematics (ICASEM 2017), 5 - 07 May 2017, (Summary Text)

13. Powder Injection Molded of Ti10Nb10Zr Alloy for Bio applications Electrochemical Properties and Biocompatibility

yemişci ı., GÜLSOY H. Ö., MUTLU Ö., GÜLSOY N.

worldPM2016, 9 - 13 October 2016, (Full Text)

14. Covalent immobilization of LL 37 onto lignin caprolactone based polymer and investigation of its antimicrobial activities

OGAN A., YÜCE DURSUN B., Farah D. A., Aslı B. C., ÇAĞLAYAN P., MUTLU Ö., et al.

FEBS, 3 - 08 September 2016, (Summary Text)

15. Comprehensive computational analysis of Theileria annulata enolase by comparative modeling and docking

Mutlu Ö., Yakarsönmez S., Sarıyer E., Danış Ö., Yüce Dursun B., Topuzoğulları M., et al.

17th European Congress on Biotechnology, Krakow, Poland, 3 - 06 July 2016, pp.171, (Summary Text)

16. Structural characterization of the Trypanosoma brucei CK2A1 HDAC1 HDAC2 interactions by molecular modeling and protein protein docking

MUTLU Ö.

Belgrade Bioinformatics 2016 Conference, 20 - 24 June 2016 Sustainable Development

17. Protein interaction network construction and analysis using the quantitative proteomics data

MUTLU Ö., GÜLSOY N.

Belgrade Bioinformatics 2016 Conference, Belgrat, Montenegro, 20 - 24 June 2016, pp.127, (Summary Text)

18. Homology Modelling of Lactate Dehydrogenase from Theileria annulata

NURAL B., ERDEMİR A., MUTLU Ö., BALIK D.

3rd International BAU-Drug Design Congress, 1 - 03 October 2015

19. S MA057 LL 37 PEPTİDİNİN LİGNİN KAPROLAKTON POLİMERİNE İMMOBİLİZASYONU VE ANTİMİKROBİYAL ÖZELLİĞİNİN İNCELENMESİ

DEKA A. F., OGAN A., BEYLER ÇİĞİL A., KAHRAMAN M. V., MUTLU Ö., YÜCE DURSUN B., et al.

27. Ulusal Kimya Kongresi 23-28 Agustos 2015, Turkey, 23 - 28 August 2015

20. LL 37 Peptidinin Lignin Kaprolakton Polimerine İmmobilizasyonu ve Antimikrobiyal Özelliğinin İncelenmesi

FARAH D., OGAN A., YÜCE DURSUN B., BEYLER ÇİĞİL A., KAHRAMAN M. V., MUTLU Ö., et al.

27. Ulusal Kimya Kongresi, Çanakkale, Turkey, 23 - 28 August 2015

21. K7 ve K15 Kumarin Türevlerinin Bacteroides fragilis in D Laktat Dehidrogenazı Üzerine Olan Etkilerinin In silico ve Spektral Analizi

UĞUREL E., DANIŞ Ö., MUTLU Ö., YÜCE DURSUN B., GÜNDÜZ C., BALIK D.

Ulusal Moleküler Biyoloji ve Biyoteknoloji Kongresi, Turkey, 21 - 24 August 2015

22. Theileria annulata Enolaz Enziminin Uygun Stabilizatörler Kullanılarak Depolama Koşullarının Belirlenmesi

YAKARSÖNMEZ S., DANIŞ Ö., MUTLU Ö., YÜCE DURSUN B., AKBULUT E., BALIK D.

Ulusal Moleküler Biyoloji ve Biyoteknoloji Kongresi, Turkey, 21 - 24 August 2015

23. Enhancing the corrosion resistance and biocompability of injection molded 316L stainless steel for Bio applications

PAZARLIOĞLU S. S., BÜŞRA G., MUTLU Ö., GÜLSOY N., GÜLSOY H. Ö.

16th International Scientific Conress, CNIC 2015, 22 - 24 June 2015, (Full Text)

24. Enhancing the Corrosion Resistance and Biocompatibility of Injection Molded 316L Stainless Steel for Bio applications

PAZARLIOĞLU S. S., Büşra G., MUTLU Ö., GÜLSOY N., GÜLSOY H. Ö.

16. International Scientific Congress CNIC 2015, 22 - 26 June 2015, (Full Text)

25. Effect of Ti Nb and Zr Additives on Biocompatibility of Injection molded 316L Stainless Steel for Biomedical Application

Büşra G., MUTLU Ö., GÜLSOY N.

ICMIBE 2015: XIII International Conference on Medical Informatics and Biomedical Engineering, 26 - 27 February 2015, (Summary Text)

26. Structure Analysis and Cytotoxic Evaluation of the ZnO Nanoparticles on Human Dermal Fibroblast Cells

MUTLU Ö., GÜLSOY N.

ICMIBE 2015: XIII International Conference on Medical Informatics and Biomedical Engineering, 26 - 27 February 2015, (Summary Text)

27. Effect of Ti Nb and Zr Additives on Biocompatibility of Injection molded 316L Stainless Steel for Biomedical Applications

MUTLU Ö., GÜLSOY N.

Biomedical and Biological Engineering Conferences, 26 - 27 February 2015

28. Determination of the inhibitory effect of some coumarin derivatives on Bacteroides fragilis D LDH

UĞUREL E., DANIŞ Ö., MUTLU Ö., YÜCE DURSUN B., GÜNDÜZ C., BALIK D.

International Symposium on Molecular Chemistry, 14 - 16 December 2014

29. Effects of residue deletions from pentapeptide insertion of enzyme lactate dehydrogenase from Plasmodium vivax

MUTLU Ö., Turgut-Balik D.

European Biotechnology Congress, İstanbul, Turkey, 28 September - 01 October 2011, vol.22, (Summary Text)

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