Patient-Derived Cancer Organoids: Standardized Protocols for Tumor Cell Isolation, Organoid Generation, and Serial Passaging Across Multiple Cancers


Şahin A., Şener Akçora D., Yılmaz Göler A. M., Çakır M. O., Yılmaz B.

in: Methods in Molecular Biology, John M. Walker, Editor, Springer Nature, New York, pp.1-29, 2025

  • Publication Type: Book Chapter / Chapter Research Book
  • Publication Date: 2025
  • Publisher: Springer Nature
  • City: New York
  • Page Numbers: pp.1-29
  • Editors: John M. Walker, Editor
  • Marmara University Affiliated: Yes

Abstract

Patient-derived organoids (PDOs) preserve the architecture and heterogeneity of primary tumors and enable clinically relevant ex vivo testing. We describe standardized protocols for tumor tissue dissociation, extracellular-matrix embedding, tumor-type-specific medium formulation, serial passaging, and histologic and genomic evaluation, alongside quality control criteria to ensure viability and reproducibility across major solid cancers. These methods support precision oncology, drug screening, and translational studies using living biobanks of PDOs.